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  5. AT5G22560

AT5G22560


Description : Plant protein of unknown function (DUF247)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22560

Target Alias Description ECC score Gene Family Method Actions
AT3G50140 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
Aob_g30226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53570.t1 Aspi01Gene53570 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03828 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g39129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00877 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_08678 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37289 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41270 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07050.1 LOC_Os08g07050 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_120951g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0166.g024154 No alias not classified & original description: CDS=1-2307 0.03 OrthoFinder output from all 47 species
Solyc02g093020.3.1 Solyc02g093020 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g019310.3.1 Solyc04g019310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004158 DUF247_pln 49 500
No external refs found!