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  5. AT5G22730

AT5G22730


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22730
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G66640 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G78750 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23955 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT5G22720 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44940 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004526 ribonuclease P activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 177 202
IPR006566 FBD 391 434
IPR001810 F-box_dom 29 64
No external refs found!