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  5. AT5G23400

AT5G23400


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0000133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255490 evm_27.TU.AmTr_v1... Receptor-like protein kinase OS=Ipomoea nil 0.04 OrthoFinder output from all 47 species
AT3G12610 DRT100 Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Aev_g38726 ATPSKR1, PSKR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65513.t1 AtRLP30, RLP30,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018835001 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.06 OrthoFinder output from all 47 species
GSVIVT01032973001 CLI1, RPK2, TOAD2 LRR receptor-like serine/threonine-protein kinase RPK2... 0.03 OrthoFinder output from all 47 species
GSVIVT01034362001 No alias Receptor-like protein kinase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_01894 RLP53, AtRLP53 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58080.1 LOC_Os04g58080 LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 OrthoFinder output from all 47 species
LOC_Os11g35410.1 RLP53, AtRLP53,... Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os11g35450.1 LOC_Os11g35450 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
MA_480885g0010 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
MA_673492g0010 No alias MDIS1-interacting receptor like kinase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_953128g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g13722 EFR not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39340 FEI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123884 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.03 OrthoFinder output from all 47 species
Spa_g54966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011225_P001 Zm00001e011225 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e020856_P001 Zm00001e020856 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Zm00001e022978_P001 Zm00001e022978 LRR receptor-like serine/threonine-protein kinase EFR... 0.03 OrthoFinder output from all 47 species
Zm00001e023003_P001 Zm00001e023003 Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
BP GO:0007165 signal transduction IC Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071258 cellular response to gravity IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 33 73
IPR001611 Leu-rich_rpt 157 216
IPR001611 Leu-rich_rpt 469 528
IPR001611 Leu-rich_rpt 229 288
No external refs found!