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AT5G24180


Description : Lipase class 3-related protein


Gene families : OG0000838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24180
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G24230 No alias Lipase class 3-related protein 0.05 OrthoFinder output from all 47 species
Dac_g14822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11151 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_11156 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39810.1 LOC_Os07g39810 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 119 194
No external refs found!