AT5G25830 (GATA12)

Aliases : GATA12

Description : GATA transcription factor 12

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G25830

Target	Alias	Description	ECC score	Gene Family Method
AT2G45050	GATA2	GATA transcription factor 2	0.03	OrthoFinder output from all 47 species
Aev_g17183	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21776	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g05309	GATA9	transcription factor *(A/B-GATA) & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g15306	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26857	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g04851	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g28449	GATA5	transcription factor *(A/B-GATA) & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g41627	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007623	circadian rhythm	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	221	254

External Links

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