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  5. AT5G26910

AT5G26910


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).


Gene families : OG0001929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G26910
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00077370 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g057975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53338.t1 Aspi01Gene53338 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G067600.1 Ceric.35G067600 not classified & original description: pacid=50581436... 0.03 OrthoFinder output from all 47 species
Mp6g14750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000419 RNA polymerase V complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 673 820
IPR032795 DUF3741-assoc 76 102
No external refs found!