AT5G27750

Description : F-box/FBD-like domains containing protein

Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G27750
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AT1G16940	No alias	F-box/RNI-like/FBD-like domains-containing protein	0.03	OrthoFinder output from all 47 species
AT1G32020	No alias	F-box family protein	0.04	OrthoFinder output from all 47 species
AT1G60400	No alias	F-box/RNI-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT1G60410	No alias	F-box family protein	0.04	OrthoFinder output from all 47 species
AT1G66640	No alias	RNI-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT1G78760	No alias	F-box/RNI-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G22600	No alias	FBD / Leucine Rich Repeat domains containing protein	0.03	OrthoFinder output from all 47 species
AT5G44970	No alias	Protein with RNI-like/FBD-like domains	0.04	OrthoFinder output from all 47 species
AT5G53840	No alias	F-box/RNI-like/FBD-like domains-containing protein	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	RCA	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006396	RNA processing	RCA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009410	response to xenobiotic stimulus	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	RCA	Interproscan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	RCA	Interproscan
BP	GO:0016579	protein deubiquitination	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
MF	GO:0008378	galactosyltransferase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	6	42
IPR006566	FBD	381	423
IPR013101	Leu-rich_rpt_2	163	188

External Links

No external refs found!

AT5G27750

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation