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  5. AT5G37600

AT5G37600 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : glutamine synthase clone R1


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37600
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00120730 GS2, ATGSL1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
Adi_g103788 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Adi_g117706 ATGSR1, GLN1;1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09560 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Als_g43382 ATGSR1, GLN1;1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58378 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16666.t1 GLN1;4, Aspi01Gene16666 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33935.t1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56798.t1 GLN1;4, Aspi01Gene56798 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011642 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G070700.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Cre02.g113200 GLN1.3, ATGSKB6, GLN1;3 Nutrient uptake.nitrogen assimilation.ammonium... 0.01 OrthoFinder output from all 47 species
Dac_g37528 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008483001 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12290.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.02 OrthoFinder output from all 47 species
Len_g05760 GLN1;4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44821 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11416 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Mp1g03980.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Msp_g33326 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Solyc04g014510.3.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.09 OrthoFinder output from all 47 species
Solyc05g051250.3.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.04 OrthoFinder output from all 47 species
Spa_g39139 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Tin_g02581 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000880_P002 ATGSR1, GLN1;1,... Glutamine synthetase root isozyme 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IDA Interproscan
MF GO:0004356 glutamate-ammonia ligase activity ISS Interproscan
MF GO:0005507 copper ion binding IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol TAS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0009749 response to glucose RCA Interproscan
BP GO:0009750 response to fructose RCA Interproscan
BP GO:0010150 leaf senescence IEP Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
BP GO:0042128 nitrate assimilation TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005313 L-glutamate transmembrane transporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015174 basic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015189 L-lysine transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015800 acidic amino acid transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015807 L-amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042886 amide transport IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042937 tripeptide transmembrane transporter activity IEP HCCA
BP GO:0042938 dipeptide transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043201 response to leucine IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051938 L-glutamate import IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080052 response to histidine IEP HCCA
BP GO:0080053 response to phenylalanine IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 126 347
IPR008147 Gln_synt_N 22 97
No external refs found!