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  5. AT5G37860

AT5G37860


Description : Heavy metal transport/detoxification superfamily protein


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37860
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265500 HIPP22,... Heavy metal-associated isoprenylated plant protein 22... 0.03 OrthoFinder output from all 47 species
AMTR_s00018p00061120 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 45... 0.02 OrthoFinder output from all 47 species
AMTR_s00034p00190630 NAKR2,... Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G56210 No alias Heavy metal transport/detoxification superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G53530 NAKR3 Chloroplast-targeted copper chaperone protein 0.05 OrthoFinder output from all 47 species
AT4G08570 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39700 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g040832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35875 NAKR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12058.t1 Aspi01Gene12058 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30421.t1 Aspi01Gene30421 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58660.t1 Aspi01Gene58660 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G002900.1 Ceric.07G002900 not classified & original description: pacid=50626153... 0.03 OrthoFinder output from all 47 species
Ceric.18G044200.1 Ceric.18G044200 not classified & original description: pacid=50621319... 0.03 OrthoFinder output from all 47 species
Ceric.24G019500.1 Ceric.24G019500 not classified & original description: pacid=50629311... 0.02 OrthoFinder output from all 47 species
Dac_g12205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05382 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011777001 No alias Heavy metal-associated isoprenylated plant protein 37... 0.06 OrthoFinder output from all 47 species
GSVIVT01019700001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.06 OrthoFinder output from all 47 species
GSVIVT01030880001 No alias Heavy metal-associated isoprenylated plant protein 37... 0.06 OrthoFinder output from all 47 species
Gb_20919 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_33825 No alias copper chaperone (CCH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41200.1 LOC_Os01g41200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g60480.1 NAKR2, LOC_Os03g60480 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39210.1 LOC_Os10g39210 Heavy metal-associated isoprenylated plant protein 30... 0.04 OrthoFinder output from all 47 species
Len_g02639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_175196g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 OrthoFinder output from all 47 species
MA_857107g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g01740.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g01820.1 ATX1, ATATX1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01709 HIPP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24778 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g45463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
Solyc06g050710.4.1 Solyc06g050710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004204_P001 Zm00001e004204 Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e019945_P001 Zm00001e019945 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e035823_P003 Zm00001e035823 Heavy metal-associated isoprenylated plant protein 36... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006825 copper ion transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 15 66
No external refs found!