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  5. AT5G38120

AT5G38120 (4CL8)


Aliases : 4CL8

Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38120
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 OPCL1,... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.05 OrthoFinder output from all 47 species
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.04 OrthoFinder output from all 47 species
Adi_g012372 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015908 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10320 ACOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45695.t2 OPCL1, Aspi01Gene45695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077700.1 Ceric.11G077700 not classified & original description: pacid=50595996... 0.02 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.03 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.02 OrthoFinder output from all 47 species
Dac_g07176 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28355 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_04706 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_04708 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_21821 OPCL1 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
LOC_Os03g05780.1 LOC_Os03g05780 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_10426784g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo177466 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g07385 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07437 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016207 4-coumarate-CoA ligase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
CC GO:0005955 calcineurin complex IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006971 hypotonic response IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010254 nectary development IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0010334 sesquiterpene synthase activity IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019605 butyrate metabolic process IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
MF GO:0034002 (R)-limonene synthase activity IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042214 terpene metabolic process IEP HCCA
BP GO:0042539 hypotonic salinity response IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0047760 butyrate-CoA ligase activity IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
MF GO:0050550 pinene synthase activity IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
MF GO:0050552 (4S)-limonene synthase activity IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051761 sesquiterpene metabolic process IEP HCCA
BP GO:0051762 sesquiterpene biosynthetic process IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0071836 nectar secretion IEP HCCA
MF GO:0080015 sabinene synthase activity IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 461 536
IPR000873 AMP-dep_Synth/Lig_com 47 452
No external refs found!