AT5G39950 (TRXH2, TRX2, ATH2,...)

Aliases : TRXH2, TRX2, ATH2, ATTRXH2, ATTRX2

Description : thioredoxin 2

Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39950

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00240160	TO1, ATO1,...	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.04	OrthoFinder output from all 47 species
Adi_g028432	ATTRX4, ATH4	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g076035	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20534	TRXH2, TRX2,...	O-type thioredoxin *(Trx-O) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g08816	TRXH2, TRX2,...	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g36385	ATH5, ATTRX5, TRX5, LIV1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g36349	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g44475	ATHM1, THM1, TRX-M1, ATM1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g44773	ATHM4, TRX-M4, ATM4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g45755	ATHM4, TRX-M4, ATM4	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g13818	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g45371	ATTRX4, ATH4	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g56283	ATH5, ATTRX5, TRX5, LIV1	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62735.t2	ATH9, TH9, TRX...	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0064.g035450	ATH5, ATTRX5, TRX5, LIV1	H-type thioredoxin *(Trx-H) & original description: CDS=7-366	0.05	OrthoFinder output from all 47 species
Ceric.02G027000.1	ATH9, TH9, TRX...	H-type thioredoxin *(Trx-H) & original description:...	0.04	OrthoFinder output from all 47 species
Cre05.g248500	TRXH2, TRX2,...	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.01	OrthoFinder output from all 47 species
Cre09.g391900	ATTRX4, ATH4	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Dcu_g07911	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01009794001	ATTRX1, ATTRX H1, TRX1	Protein modification.S-nitrosylation and...	0.04	OrthoFinder output from all 47 species
GSVIVT01032600001	TRXH2, TRX2,...	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.06	OrthoFinder output from all 47 species
Gb_24299	ATH9, TH9, TRX H9	H-type thioredoxin	0.04	OrthoFinder output from all 47 species
Lfl_g00444	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31769	ATTRX1, ATTRX H1, TRX1	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
MA_9543055g0010	ATH9, TH9, TRX H9	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g37993	ATTRX4, ATH4	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c1_28390V3.1	ATTRX1, ATTRX...	thioredoxin H-type 1	0.02	OrthoFinder output from all 47 species
Ppi_g06672	ATTRX1, ATTRX H1, TRX1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g09655	TRXH2, TRX2,...	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g23821	ATTRX1, ATTRX H1, TRX1	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021886	ATTRX1, ATTRX H1, TRX1	H-type thioredoxin *(Trx-H) & original description: CDS=1-546	0.03	OrthoFinder output from all 47 species
Smo77169	ATTRX1, ATTRX H1, TRX1	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Smo7911	ATHIP2, TDX, HIP, ATTDX	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Zm00001e032086_P001	ATTRX3, ATTRXH3,...	H-type thioredoxin. protein-S-nitrosothiol reductase (TRX5)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000103	sulfate assimilation	IGI	Interproscan
BP	GO:0000280	nuclear division	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005829	cytosol	TAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0007000	nucleolus organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IDA	Interproscan
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048285	organelle fission	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005681	spliceosomal complex	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008794	arsenate reductase (glutaredoxin) activity	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
MF	GO:0030611	arsenate reductase activity	IEP	HCCA
MF	GO:0030613	oxidoreductase activity, acting on phosphorus or arsenic in donors	IEP	HCCA
MF	GO:0030614	oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	40	129

External Links

No external refs found!

AT5G39950 (TRXH2, TRX2, ATH2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation