Description : 60S acidic ribosomal protein family
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G40040 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g06840 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18132.t1 | Aspi01Gene18132 | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037804 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34407 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020830.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39007 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12451 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21399 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | ISS | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| CC | GO:0005829 | cytosol | IDA | Interproscan |
| CC | GO:0005840 | ribosome | ISS | Interproscan |
| BP | GO:0006414 | translational elongation | ISS | Interproscan |
| CC | GO:0022626 | cytosolic ribosome | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
| CC | GO:0005795 | Golgi stack | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0007049 | cell cycle | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| MF | GO:0008565 | obsolete protein transporter activity | IEP | HCCA |
| BP | GO:0009555 | pollen development | IEP | HCCA |
| BP | GO:0009556 | microsporogenesis | IEP | HCCA |
| BP | GO:0009786 | regulation of asymmetric cell division | IEP | HCCA |
| BP | GO:0034293 | sexual sporulation | IEP | HCCA |
| BP | GO:0043934 | sporulation | IEP | HCCA |
| BP | GO:0048229 | gametophyte development | IEP | HCCA |
| BP | GO:0048236 | plant-type sporogenesis | IEP | HCCA |
| BP | GO:0051302 | regulation of cell division | IEP | HCCA |
| BP | GO:0051321 | meiotic cell cycle | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
