AT5G40430 (MYB22, AtMYB22)

Aliases : MYB22, AtMYB22

Description : myb domain protein 22

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40430

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00225600	MYBR1, MYB44,...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AT1G26780	AtMYB117, LOF1, MYB117	myb domain protein 117	0.04	OrthoFinder output from all 47 species
AT1G43330	No alias	Homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT2G39880	AtMYB25, MYB25	myb domain protein 25	0.03	OrthoFinder output from all 47 species
AT3G27785	PGA37, ATMYB118, MYB118	myb domain protein 118	0.05	OrthoFinder output from all 47 species
AT5G11050	MYB64, AtMYB64	myb domain protein 64	0.04	OrthoFinder output from all 47 species
AT5G39700	MYB89, AtMYB89	myb domain protein 89	0.07	OrthoFinder output from all 47 species
Azfi_s0001.g000218	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Cba_g25966	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cre07.g345350	MYBR1, MYB44,...	RNA biosynthesis.transcriptional activation.MYB...	0.01	OrthoFinder output from all 47 species
Dcu_g21214	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Dde_g28841	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
GSVIVT01029941001	LOF2, MYB105, ATMYB105	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
LOC_Os01g63680.1	PGA37, ATMYB118,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Len_g56915	MYB88, AtMYB88	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_4704g0010	AtMYB117, LOF1, MYB117	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Mp8g11870.1	AtMYB117, LOF1, MYB117	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Pir_g65999	MYB73, ATMYB73	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Sam_g14793	No alias	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Solyc09g011780.3.1	MYB1, AtMYB1,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e005044_P002	ATMYB119,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G40430 (MYB22, AtMYB22)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation