AT5G40930 (TOM20-4)

Aliases : TOM20-4

Description : translocase of outer membrane 20-4

Gene families : OG0001660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001660_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G40930

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aspi01Gene64123.t1	TOM20-2, Aspi01Gene64123	receptor component *(Tom20) of outer mitochondrion...	0.02	OrthoFinder output from all 47 species
Pp3c27_5800V3.1	TOM20-3, Pp3c27_5800	translocase of outer membrane 20 kDa subunit 3	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005742	mitochondrial outer membrane translocase complex	IDA	Interproscan
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	TAS	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006626	protein targeting to mitochondrion	IMP	Interproscan
BP	GO:0006626	protein targeting to mitochondrion	RCA	Interproscan
BP	GO:0006626	protein targeting to mitochondrion	TAS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008320	protein transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015450	protein-transporting ATPase activity	TAS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022884	macromolecule transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098799	outer mitochondrial membrane protein complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140318	protein transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G40930 (TOM20-4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation