AT5G41700 (ATUBC8, UBC8)

Aliases : ATUBC8, UBC8

Description : ubiquitin conjugating enzyme 8

Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G41700
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00068850	ATUBC11, UBC11,...	Protein degradation.peptide...	0.04	OrthoFinder output from all 47 species
Adi_g018236	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23199	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Als_g39881	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59364.t1	UBC10, Aspi01Gene59364	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15701	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27631	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g31392	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g48150	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Cre06.g292800	UBC30	Protein degradation.peptide...	0.02	OrthoFinder output from all 47 species
Dcu_g07349	UBC30	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g20628	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04269	ATUBC8, UBC8	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019484001	UBC10	Protein degradation.peptide...	0.03	OrthoFinder output from all 47 species
Len_g26237	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23404	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g31742	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g48734	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05085	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g38609	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15849	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018309	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original...	0.04	OrthoFinder output from all 47 species
Sam_g48365	No alias	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g007510.3.1	UBC10, Solyc06g007510	conjugation E2 protein	0.04	OrthoFinder output from all 47 species
Solyc08g008220.3.1	UBC10, Solyc08g008220	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Solyc08g081945.1.1	UBC10, Solyc08g081945	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Spa_g01833	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g05712	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38402	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03039	ATUBC11, UBC11	E2 MUB ubiquiTin-conjugaTing enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e027992_P001	UBC9, Zm00001e027992	conjugation E2 protein	0.05	OrthoFinder output from all 47 species
Zm00001e035345_P001	EMB144, CIN4,...	E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IDA	Interproscan
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009960	endosperm development	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048443	stamen development	IEP	Interproscan
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	RCA	Interproscan
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006809	nitric oxide biosynthetic process	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
BP	GO:0046209	nitric oxide metabolic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:1900459	positive regulation of brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	5	141

External Links

No external refs found!

AT5G41700 (ATUBC8, UBC8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation