AT5G42240 (scpl42)

Aliases : scpl42

Description : serine carboxypeptidase-like 42

Gene families : OG0000072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G42240

Target	Alias	Description	ECC score	Gene Family Method
AT2G35770	scpl28	serine carboxypeptidase-like 28	0.04	OrthoFinder output from all 47 species
Ala_g23781	SCPL34	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Als_g00829	scpl42	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Als_g10410	scpl30	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Als_g11691	scpl44	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aob_g18416	scpl30	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene54869.t1	scpl44, Aspi01Gene54869	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene65086.t1	SCPL24, BRS1,...	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Dac_g14174	SCPL24, BRS1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Dcu_g12325	scpl44	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01012062001	scpl35	Protein degradation.peptidase families.serine-type...	0.04	OrthoFinder output from all 47 species
Gb_10864	scpl26	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
Gb_33476	scpl20	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
LOC_Os01g06490.1	scpl26, LOC_Os01g06490	serine carboxypeptidase	0.04	OrthoFinder output from all 47 species
LOC_Os01g61690.1	SCPL27, LOC_Os01g61690	serine carboxypeptidase	0.05	OrthoFinder output from all 47 species
Lfl_g09048	scpl31	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
MA_10429984g0010	scpl31	serine carboxypeptidase	0.05	OrthoFinder output from all 47 species
MA_365616g0010	scpl33	serine carboxypeptidase	0.05	OrthoFinder output from all 47 species
MA_89609g0010	SCPL45	serine carboxypeptidase	0.05	OrthoFinder output from all 47 species
Ore_g06723	SCPL24, BRS1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Smo403390	scpl44	Protein degradation.peptidase families.serine-type...	0.05	OrthoFinder output from all 47 species
Spa_g12288	SCPL24, BRS1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Zm00001e007984_P001	scpl18, Zm00001e007984	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
Zm00001e018351_P001	scpl20, Zm00001e018351	serine carboxypeptidase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004180	carboxypeptidase activity	None	Extended
MF	GO:0004185	serine-type carboxypeptidase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008238	exopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070008	serine-type exopeptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005686	U2 snRNP	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
CC	GO:0015030	Cajal body	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001563	Peptidase_S10	38	460

External Links

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AT5G42240 (scpl42)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation