AT5G42630 (KAN4, ATS)

Aliases : KAN4, ATS

Description : Homeodomain-like superfamily protein

Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G42630
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00040830	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
AT4G13640	UNE16	Homeodomain-like superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g006433	PHL1	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g052692	No alias	transcription factor *(CLAUSA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077902	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g22830	No alias	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g04915	KAN, KAN1	KANADI-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g01625	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g04252	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g38602	PHR1, AtPHR1	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03462.t1	Aspi01Gene03462	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene21949.t1	Aspi01Gene21949	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g27691	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g34786	No alias	GARP subgroup PHL transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g07086	KAN2	KANADI-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g08284	KAN4, ATS	KANADI-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g16600	No alias	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21452	No alias	GARP subgroup PHL transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g48326	No alias	GARP subgroup PHL transcription factor & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01005342001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Gb_17469	KAN, KAN1	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
MA_1432g0010	No alias	Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
MA_15920g0010	No alias	G2-like GARP transcription factor	0.02	OrthoFinder output from all 47 species
MA_28188g0010	No alias	G2-like GARP transcription factor	0.02	OrthoFinder output from all 47 species
Ore_g08018	KAN2	KANADI-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29568	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pp3c10_24540V3.1	Pp3c10_24540	myb-like HTH transcriptional regulator family protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000821	No alias	transcription factor *(CLAUSA) & original description:...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005961	KAN3	not classified & original description: CDS=52-843	0.02	OrthoFinder output from all 47 species
Smo47303	KAN2	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Solyc08g076400.3.1	KAN2, Solyc08g076400	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Solyc10g080460.2.1	Solyc10g080460	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Spa_g28810	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g03896	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e021698_P001	KAN2, Zm00001e021698	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e023282_P002	KAN2, Zm00001e023282	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e033756_P003	Zm00001e033756	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e034056_P001	KAN, KAN1, Zm00001e034056	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e040203_P001	KAN2, Zm00001e040203	G2-like GARP transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e041450_P001	Zm00001e041450	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IMP	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048481	plant ovule development	IMP	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080060	integument development	IMP	Interproscan
BP	GO:0080060	integument development	IGI	Interproscan
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0010268	brassinosteroid homeostasis	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0055088	lipid homeostasis	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	107	158

External Links

No external refs found!

AT5G42630 (KAN4, ATS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation