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  5. AT5G42880

AT5G42880


Description : Plant protein of unknown function (DUF827)


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G42880
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT1G12150 No alias Plant protein of unknown function (DUF827) 0.04 OrthoFinder output from all 47 species
AT1G45545 No alias Plant protein of unknown function (DUF827) 0.08 OrthoFinder output from all 47 species
AT5G55860 No alias Plant protein of unknown function (DUF827) 0.04 OrthoFinder output from all 47 species
Als_g35162 WEB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47363.t1 Aspi01Gene47363 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033945 WEB1 not classified & original description: CDS=90-2387 0.03 OrthoFinder output from all 47 species
Cba_g04649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z051600.1 Ceric.1Z051600 not classified & original description: pacid=50565823... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28450.1 LOC_Os09g28450 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.04 OrthoFinder output from all 47 species
Msp_g25980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c26_6460V3.1 Pp3c26_6460 No annotation 0.01 OrthoFinder output from all 47 species
Solyc05g042150.2.1 Solyc05g042150 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.02 OrthoFinder output from all 47 species
Solyc07g022910.3.1 WEB1, Solyc07g022910 component WEB1 of WEB1-PMI2 cp-actin filament... 0.04 OrthoFinder output from all 47 species
Solyc12g088830.3.1 WEB1, Solyc12g088830 component WEB1 of WEB1-PMI2 cp-actin filament... 0.05 OrthoFinder output from all 47 species
Spa_g53859 WEB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001910_P001 WEB1, Zm00001e001910 component WEB1 of WEB1-PMI2 cp-actin filament... 0.02 OrthoFinder output from all 47 species
Zm00001e009948_P001 Zm00001e009948 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.04 OrthoFinder output from all 47 species
Zm00001e034348_P003 Zm00001e034348 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 132 666
No external refs found!