AT5G42980 (ATTRX3, ATTRXH3,...)

Aliases : ATTRX3, ATTRXH3, ATH3, TRX3, TRXH3

Description : thioredoxin 3

Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G42980

Target	Alias	Description	ECC score	Gene Family Method
Adi_g028432	ATTRX4, ATH4	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g090007	TRXH2, TRX2,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08816	TRXH2, TRX2,...	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30073	ATHM4, TRX-M4, ATM4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g36385	ATH5, ATTRX5, TRX5, LIV1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g42081	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g45371	ATTRX4, ATH4	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g56283	ATH5, ATTRX5, TRX5, LIV1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g01624	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021428.2	ATTRX1, ATTRX H1, TRX1	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021721.17	ATTRX3, ATTRXH3,...	No description available	0.02	OrthoFinder output from all 47 species
Cre05.g248500	TRXH2, TRX2,...	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Cre09.g391900	ATTRX4, ATH4	Redox homeostasis.cytosol/mitochondrion/nucleus redox...	0.02	OrthoFinder output from all 47 species
Dcu_g07911	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g44107	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31565	TRXH2, TRX2,...	plastidial thioredoxin *(TrxL2) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g00444	ATH9, TH9, TRX H9	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10909	ATTRX1, ATTRX H1, TRX1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
MA_164160g0010	ATCXXS1, CXXS1	H-type thioredoxin	0.03	OrthoFinder output from all 47 species
MA_7674884g0010	ATCXXS1, CXXS1	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Pir_g29706	ATCXXS1, CXXS1	H-type thioredoxin *(Trx-H) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g30231	No alias	H-type thioredoxin *(Trx-H) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g005810.3.1	TRXH2, TRX2,...	H-type thioredoxin	0.04	OrthoFinder output from all 47 species
Solyc05g006830.3.1	TRXH2, TRX2,...	H-type thioredoxin	0.05	OrthoFinder output from all 47 species
Solyc05g006855.1.1	TRXH2, TRX2,...	H-type thioredoxin	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005829	cytosol	TAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006457	protein folding	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IMP	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009636	response to toxic substance	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009734	auxin-activated signaling pathway	RCA	Interproscan
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010188	response to microbial phytotoxin	IMP	Interproscan
BP	GO:0010286	heat acclimation	IMP	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IDA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	IGI	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051259	protein complex oligomerization	IDA	Interproscan
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	HCCA
MF	GO:0004866	endopeptidase inhibitor activity	IEP	HCCA
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010088	phloem development	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0030414	peptidase inhibitor activity	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0042762	regulation of sulfur metabolic process	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0043394	proteoglycan binding	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
MF	GO:0061134	peptidase regulator activity	IEP	HCCA
MF	GO:0061135	endopeptidase regulator activity	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0070417	cellular response to cold	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	9	109

External Links

No external refs found!

AT5G42980 (ATTRX3, ATTRXH3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation