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  5. AT5G43520

AT5G43520


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G43520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00012p00263620 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G17740 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from all 47 species
AT2G37780 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G37820 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT2G44370 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G44390 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G44400 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
Adi_g052462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18622 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0408.g068454 No alias not classified & original description: CDS=95-1408 0.04 OrthoFinder output from all 47 species
Ceric.16G051800.1 Ceric.16G051800 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G051900.1 Ceric.16G051900 E3 ubiquitin ligase *(AIRP1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G006500.1 Ceric.33G006500 E3 ubiquitin ligase *(AIRP1) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g36226 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g41910.1 LOC_Os07g41910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g41920.1 LOC_Os07g41920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41980.1 LOC_Os07g41980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42040.1 LOC_Os07g42040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g20150.1 LOC_Os09g20150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_4432g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004401 No alias not classified & original description: CDS=1-1194 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605 No alias not classified & original description: CDS=1-1329 0.04 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g073800.2.1 Solyc01g073800 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g073850.1.1 Solyc01g073850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g011260.2.1 Solyc09g011260 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g011270.4.1 Solyc09g011270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021370_P001 Zm00001e021370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0048527 lateral root development RCA Interproscan
BP GO:0048589 developmental growth RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
MF GO:0045431 flavonol synthase activity IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 134 185
IPR004146 DC1 19 65
IPR004146 DC1 75 123
No external refs found!