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  5. AT5G44390

AT5G44390


Description : FAD-binding Berberine family protein


Gene families : OG0000307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44390
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
AMTR_s00743p00011410 evm_27.TU.AmTr_v1... Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G26380 No alias FAD-binding Berberine family protein 0.1 OrthoFinder output from all 47 species
AT1G26390 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT1G26410 No alias FAD-binding Berberine family protein 0.1 OrthoFinder output from all 47 species
AT1G26420 No alias FAD-binding Berberine family protein 0.1 OrthoFinder output from all 47 species
AT1G30700 No alias FAD-binding Berberine family protein 0.06 OrthoFinder output from all 47 species
AT1G30730 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT4G20830 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT4G20860 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from all 47 species
AT5G44360 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT5G44380 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
Adi_g040975 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aob_g32306 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aob_g33484 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aop_g13856 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene41823.t1 Aspi01Gene41823 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64417.t1 Aspi01Gene64417 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64428.t1 Aspi01Gene64428 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68383.t1 Aspi01Gene68383 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene68384.t1 Aspi01Gene68384 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70320.t1 Aspi01Gene70320 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Azfi_s0359.g066822 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g76213 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dac_g03939 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g10857 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dcu_g33683 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g35516 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dde_g48627 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01021720001 MEE23, EDA28 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.08 OrthoFinder output from all 47 species
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01021726001 No alias Berberine bridge enzyme-like 14 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Gb_21188 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_24415 MEE23, EDA28 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os02g14090.1 LOC_Os02g14090 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35560.1 LOC_Os06g35560 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
LOC_Os06g35630.1 LOC_Os06g35630 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os06g35700.1 LOC_Os06g35700 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06190.1 LOC_Os08g06190 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Len_g19137 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Lfl_g35689 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
MA_10428737g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
MA_9511312g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Nbi_g30829 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ore_g13598 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g18955 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ore_g30060 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g38675 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Solyc02g022850.1.1 Solyc02g022850 Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc02g069690.1.1 MEE23, EDA28,... Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g070070.1.1 Solyc02g070070 Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g070090.1.1 Solyc02g070090 Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g070110.1.1 Solyc02g070110 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
Solyc02g070160.1.1 Solyc02g070160 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Solyc02g079440.3.1 Solyc02g079440 Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g054540.1.1 Solyc10g054540 Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g09108 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Zm00001e014361_P001 Zm00001e014361 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Zm00001e030681_P001 Zm00001e030681 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Zm00001e040211_P001 Zm00001e040211 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 87 224
IPR012951 BBE 480 538
No external refs found!