AT5G46410 (SSP4)

Aliases : SSP4

Description : SCP1-like small phosphatase 4

Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G46410
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00099670	SSP5,...	Protein modification.dephosphorylation.aspartate-based...	0.03	OrthoFinder output from all 47 species
Dcu_g18938	SSP5	subcluster B phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001951001	SSP4b	Protein modification.dephosphorylation.aspartate-based...	0.04	OrthoFinder output from all 47 species
GSVIVT01021382001	SSP4	Protein modification.dephosphorylation.aspartate-based...	0.02	OrthoFinder output from all 47 species
Gb_40540	SSP5	RNA polymerase-II phosphatase. subcluster B phosphatase	0.02	OrthoFinder output from all 47 species
Sam_g06488	No alias	subcluster B phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g071250.3.1	SSP4, Solyc02g071250	RNA polymerase-II phosphatase. subcluster B phosphatase	0.09	OrthoFinder output from all 47 species
Zm00001e020400_P002	SSP4, Zm00001e020400	RNA polymerase-II phosphatase. subcluster B phosphatase	0.02	OrthoFinder output from all 47 species
Zm00001e027927_P003	SSP4, Zm00001e027927	RNA polymerase-II phosphatase. subcluster B phosphatase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	None	Extended
MF	GO:0004722	protein serine/threonine phosphatase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006470	protein dephosphorylation	IDA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009608	response to symbiont	None	Extended
BP	GO:0009610	response to symbiotic fungus	RCA	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043090	amino acid import	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006987	obsolete activation of signaling protein activity involved in unfolded protein response	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008240	tripeptidyl-peptidase activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0017050	D-erythro-sphingosine kinase activity	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
CC	GO:0031312	extrinsic component of organelle membrane	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
CC	GO:0042406	extrinsic component of endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0070300	phosphatidic acid binding	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004274	FCP1_dom	282	442

External Links

No external refs found!

AT5G46410 (SSP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation