AT5G48890

Description : C2H2-like zinc finger protein

Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G48890
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00149p00097070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
AT2G41940	ZFP8	zinc finger protein 8	0.02	OrthoFinder output from all 47 species
AT3G09290	TAC1	telomerase activator1	0.05	OrthoFinder output from all 47 species
AT5G06070	RAB, RBE	C2H2 and C2HC zinc fingers superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G10970	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G43540	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G57520	ATZFP2, ZFP2	zinc finger protein 2	0.06	OrthoFinder output from all 47 species
Adi_g009388	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g117519	ZFP4	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g12053	ZFP6	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g09410	ZFP1, ATZFP1	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g21563	ZFP1, ATZFP1	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene51183.t1	ZFP5, Aspi01Gene51183	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene56786.t1	Aspi01Gene56786	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene61235.t1	Aspi01Gene61235	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene67787.t2	ZFP6, Aspi01Gene67787	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.05G102100.1	Ceric.05G102100	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.1Z234900.1	ZFP10, ATZFP10,...	not classified & original description: pacid=50613671...	0.04	OrthoFinder output from all 47 species
Dac_g24028	KNU	C2H2 subclass ZFP transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dcu_g33538	ZFP11, ATZFP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g00494	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g13421	No alias	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01011610001	ZFP4	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01011890001	JAG	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
GSVIVT01016493001	RAB, RBE	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	OrthoFinder output from all 47 species
GSVIVT01031007001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.05	OrthoFinder output from all 47 species
Gb_04808	JGL, NUB	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_07777	ZFP6	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os01g04120.1	LOC_Os01g04120	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os02g57550.1	LOC_Os02g57550	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os03g05490.1	LOC_Os03g05490	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os03g11680.1	ZFP8, LOC_Os03g11680	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os04g36650.1	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os04g50070.1	ZFP10, ATZFP10,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os05g14130.1	LOC_Os05g14130	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os05g20930.1	RAB, RBE, LOC_Os05g20930	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os07g01180.1	ZFP10, ATZFP10,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os07g23450.1	LOC_Os07g23450	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10430024g0010	No alias	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
MA_113057g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g10324	No alias	C2H2 subclass ZFP transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g14881	ZFP10, ATZFP10	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g16757	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g20362	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g36250	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g21478	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g60020	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pp3c6_19230V3.1	Pp3c6_19230	C2H2 and C2HC zinc fingers superfamily protein	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021695	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g41679	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc05g009170.3.1	Solyc05g009170	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc09g011120.1.1	ZFP10, ATZFP10,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Spa_g03417	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05801	GIS	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g19895	ZFP10, ATZFP10	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e009853_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e011910_P001	Zm00001e011910	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e022212_P001	ZFP8, Zm00001e022212	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Zm00001e030783_P001	ZFP8, Zm00001e030783	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e032639_P001	ZFP10, ATZFP10,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e040612_P001	ZFP11, ATZFP11,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042752	regulation of circadian rhythm	IMP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IMP	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048586	regulation of long-day photoperiodism, flowering	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000303	response to superoxide	IEP	HCCA
BP	GO:0000305	response to oxygen radical	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003994	aconitate hydratase activity	IEP	HCCA
MF	GO:0004451	isocitrate lyase activity	IEP	HCCA
MF	GO:0004474	malate synthase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
MF	GO:0005274	allantoin:proton symporter activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006101	citrate metabolic process	IEP	HCCA
BP	GO:0006102	isocitrate metabolic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
BP	GO:0010500	transmitting tissue development	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0015720	allantoin transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016615	malate dehydrogenase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016833	oxo-acid-lyase activity	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031998	regulation of fatty acid beta-oxidation	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046320	regulation of fatty acid oxidation	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0048462	carpel formation	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0050994	regulation of lipid catabolic process	IEP	HCCA
BP	GO:0055072	iron ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0080093	regulation of photorespiration	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G48890

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation