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  5. AT5G49270

AT5G49270 (COBL9, MRH4, SHV2, DER9)


Aliases : COBL9, MRH4, SHV2, DER9

Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 COB,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
AMTR_s00041p00228050 COBL1,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00216570 IRX6, COBL4,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
AMTR_s00066p00182490 COBL10,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.06 OrthoFinder output from all 47 species
AT3G20580 COBL10 COBRA-like protein 10 precursor 0.08 OrthoFinder output from all 47 species
AT4G27110 COBL11 COBRA-like protein 11 precursor 0.06 OrthoFinder output from all 47 species
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.07 OrthoFinder output from all 47 species
Adi_g021949 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Adi_g021950 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Adi_g115193 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aev_g10925 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aev_g17419 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Aev_g36598 IRX6, COBL4 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ala_g02423 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Als_g00864 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Als_g04400 COBL11 regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Als_g15085 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aop_g04105 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aop_g18626 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03097.t1 COBL1, Aspi01Gene03097 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04671.t1 COBL1, Aspi01Gene04671 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04673.t1 COBL1, Aspi01Gene04673 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04674.t1 COBL1, Aspi01Gene04674 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36649.t1 COBL11, Aspi01Gene36649 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014792 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031370 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036477 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ceric.16G001100.1 COB, Ceric.16G001100 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ceric.25G025100.1 COBL2, Ceric.25G025100 regulatory protein *(COB) of cellulose-hemicellulose... 0.11 OrthoFinder output from all 47 species
Ceric.33G061400.1 COB, Ceric.33G061400 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ceric.34G059800.1 SEB1, COBL7,... regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dac_g00727 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Dac_g15805 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dcu_g01030 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dcu_g40673 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Dde_g00771 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dde_g26915 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ehy_g12791 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
GSVIVT01008128001 COB Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 OrthoFinder output from all 47 species
GSVIVT01008129001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 OrthoFinder output from all 47 species
GSVIVT01012641001 COBL10 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.08 OrthoFinder output from all 47 species
GSVIVT01035050001 SEB1, COBL7, ATSEB1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
GSVIVT01036565001 IRX6, COBL4 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
GSVIVT01036566001 COB Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
Gb_36719 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Gb_36720 COB COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g18910.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g30250.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.07 OrthoFinder output from all 47 species
LOC_Os03g54750.1 COB, LOC_Os03g54750 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g32110.1 COB, LOC_Os05g32110 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g47110.1 COBL10, LOC_Os06g47110 COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
LOC_Os07g41320.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Lfl_g12946 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
MA_10431440g0020 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
MA_124486g0010 COBL2 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
MA_40967g0020 COB COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
MA_637485g0010 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Mp1g17600.1 COBL11 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Mp1g18890.1 COBL10 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Mp7g06600.1 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Msp_g26241 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g04364 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Ore_g28352 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ore_g28453 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ore_g34445 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Pir_g63488 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Pp3c4_14561V3.1 Pp3c4_14561 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g03011 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ppi_g52658 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021681 IRX6, COBL4 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Smo271954 COBL1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 OrthoFinder output from all 47 species
Solyc01g103877.1.1 COBL6, Solyc01g103877 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Solyc02g089130.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
Solyc03g070440.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
Solyc03g114900.3.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.05 OrthoFinder output from all 47 species
Solyc07g064200.4.1 COBL10, Solyc07g064200 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Solyc09g075540.1.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.07 OrthoFinder output from all 47 species
Spa_g13676 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Zm00001e001386_P001 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Zm00001e012022_P001 COB, Zm00001e012022 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Zm00001e035133_P001 COBL10, Zm00001e035133 COB cellulose microfibrils and hemicellulose interaction protein 0.07 OrthoFinder output from all 47 species
Zm00001e035505_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.07 OrthoFinder output from all 47 species
Zm00001e038043_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009932 cell tip growth IMP Interproscan
BP GO:0010053 root epidermal cell differentiation IMP Interproscan
BP GO:0010054 trichoblast differentiation RCA Interproscan
CC GO:0031225 obsolete anchored component of membrane TAS Interproscan
BP GO:0048527 lateral root development RCA Interproscan
BP GO:0048589 developmental growth RCA Interproscan
BP GO:0048765 root hair cell differentiation IMP Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 232 411
No external refs found!