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  5. AT5G49300

AT5G49300 (GATA16)


Aliases : GATA16

Description : GATA transcription factor 16


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49300
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00210810 GATA5,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Aev_g14443 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17574 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10302.t2 GATA23, Aspi01Gene10302 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12734.t1 GATA5, Aspi01Gene12734 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22142.t1 BME3-ZF, BME3,... transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70889 GATA7 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G120400.1 GATA22, CGA1,... transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.07G072600.1 GATA9, Ceric.07G072600 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.18G043900.1 GATA15, Ceric.18G043900 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g03786 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20454 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05496 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18348 GATA1 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g54210.1 GATA12, LOC_Os01g54210 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g44400.1 GATA12, LOC_Os05g44400 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g07439 GATA23 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12909 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28449 GATA5 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02094 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02879 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15675 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54359 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13371 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g062760.4.1 HAN, MNP,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Tin_g18035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006272_P001 GATA17, Zm00001e006272 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e020243_P001 GATA20, Zm00001e020243 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e029060_P002 GATA9, Zm00001e029060 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 38 72
No external refs found!