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  5. AT5G53420

AT5G53420


Description : CCT motif family protein


Gene families : OG0001446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00245010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g01993 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G036500.1 Ceric.10G036500 CMF transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre07.g351550 ASML2 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g14890 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434421g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435431g0020 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Sam_g19568 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g083400.3.1 Solyc03g083400 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g096940.3.1 Solyc12g096940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IEP HCCA
MF GO:0008878 glucose-1-phosphate adenylyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009745 sucrose mediated signaling IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
MF GO:0016420 malonyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019430 removal of superoxide radicals IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
MF GO:0050736 O-malonyltransferase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0080018 anthocyanin 5-O-glucosyltransferase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0098869 cellular oxidant detoxification IEP HCCA
BP GO:1901038 cyanidin 3-O-glucoside metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1901804 beta-glucoside metabolic process IEP HCCA
BP GO:1990748 cellular detoxification IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 218 260
No external refs found!