AT5G53560 (CB5-E, ATCB5-E, ATB5-A, B5 #2)

Aliases : CB5-E, ATCB5-E, ATB5-A, B5 #2

Description : cytochrome B5 isoform E

Gene families : OG0000285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G53560

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021216	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.02	OrthoFinder output from all 47 species
Adi_g125373	B5 #5, CB5LP, ATCB5LP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g127395	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009940	No alias	not classified & original description: CDS=140-406	0.02	OrthoFinder output from all 47 species
Cba_g00360	B5 #5, CB5LP, ATCB5LP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G053700.1	CB5-E, ATCB5-E,...	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.03	OrthoFinder output from all 47 species
Cre16.g659350	B5 #3, CB5-D,...	Cell wall.cutin and suberin.cuticular lipid...	0.03	OrthoFinder output from all 47 species
Dde_g21959	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.04	OrthoFinder output from all 47 species
Len_g00997	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.02	OrthoFinder output from all 47 species
Lfl_g13436	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.04	OrthoFinder output from all 47 species
Nbi_g28757	B5 #5, CB5LP, ATCB5LP	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g05033	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.03	OrthoFinder output from all 47 species
Pp3c21_6830V3.1	B5 #3, CB5-D,...	cytochrome B5 isoform D	0.01	OrthoFinder output from all 47 species
Sam_g06571	No alias	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.03	OrthoFinder output from all 47 species
Spa_g10235	B5 #5, CB5LP, ATCB5LP	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g52697	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.04	OrthoFinder output from all 47 species
Tin_g39519	B5 #4, ATCB5-B, CB5-B	electron shuttle component *(Cyt-b5) of CER1-CER3...	0.03	OrthoFinder output from all 47 species
Zm00001e012531_P001	CB5-E, ATCB5-E,...	component Cyt-b5 of CER1-CER3 alkane-forming complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005789	endoplasmic reticulum membrane	NAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0020037	heme binding	ISS	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0003975	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
MF	GO:0009918	sterol delta7 reductase activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
CC	GO:0030176	obsolete integral component of endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001199	Cyt_B5-like_heme/steroid-bd	10	80

External Links

No external refs found!

AT5G53560 (CB5-E, ATCB5-E, ATB5-A, B5 #2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation