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  5. AT5G53600

AT5G53600


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g18704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene21365.t1 Aspi01Gene21365 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g33705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G008500.1 Ceric.27G008500 not classified & original description: pacid=50604777... 0.05 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g11842 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01021055001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_19419 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021452 No alias not classified & original description: CDS=113-766 0.01 OrthoFinder output from all 47 species
Solyc07g062020.2.1 Solyc07g062020 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
Spa_g05029 PDCB5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021782_P001 Zm00001e021782 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 28 97
No external refs found!