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  5. AT5G54280

AT5G54280 (ATMYOS1, ATM4, ATM2)


Aliases : ATMYOS1, ATM4, ATM2

Description : myosin 2


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54280

Target Alias Description ECC score Gene Family Method Actions
Als_g63406 ATM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23084 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06648 XIC, ATXIC Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath... 0.03 OrthoFinder output from all 47 species
Lfl_g04283 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0016459 myosin complex ISS Interproscan
BP GO:0030048 actin filament-based movement TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050792 regulation of viral process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 26 677
IPR000048 IQ_motif_EF-hand-BS 754 772
IPR000048 IQ_motif_EF-hand-BS 695 712
No external refs found!