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  5. AT5G55855

AT5G55855


Description : Ubiquitin-like superfamily protein


Gene families : OG0001456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001456_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55855

Target Alias Description ECC score Gene Family Method Actions
AT5G48710 No alias Ubiquitin-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G55170 ATSUMO3, SUM3,... small ubiquitin-like modifier 3 0.03 OrthoFinder output from all 47 species
LOC_Os01g68940.1 SUMO1, SUMO 1,... ubiquitin-fold protein (SUMO) 0.02 OrthoFinder output from all 47 species
LOC_Os07g38660.1 SUMO1, SUMO 1,... ubiquitin-fold protein (SUMO) 0.03 OrthoFinder output from all 47 species
LOC_Os07g38690.1 SUMO1, SUMO 1,... ubiquitin-fold protein (SUMO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 1 48
No external refs found!