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  5. AT5G55860

AT5G55860


Description : Plant protein of unknown function (DUF827)


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G55860

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00027040 WEB1,... Cytoskeleton.cp-actin-dependent plastid... 0.07 OrthoFinder output from all 47 species
AT5G42880 No alias Plant protein of unknown function (DUF827) 0.04 OrthoFinder output from all 47 species
Aob_g02191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21403.t1 WEB1, Aspi01Gene21403 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32760 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z051600.1 Ceric.1Z051600 not classified & original description: pacid=50565823... 0.03 OrthoFinder output from all 47 species
Ehy_g12705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_09422 No alias regulator protein (WALLIN) of actin organisation 0.03 OrthoFinder output from all 47 species
LOC_Os03g27800.1 LOC_Os03g27800 component WEB1 of WEB1-PMI2 cp-actin filament... 0.04 OrthoFinder output from all 47 species
Msp_g39159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g088830.3.1 WEB1, Solyc12g088830 component WEB1 of WEB1-PMI2 cp-actin filament... 0.04 OrthoFinder output from all 47 species
Spa_g08785 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53859 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12284 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001910_P001 WEB1, Zm00001e001910 component WEB1 of WEB1-PMI2 cp-actin filament... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009819 drought recovery IEP HCCA
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0019172 glyoxalase III activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1900407 regulation of cellular response to oxidative stress IEP HCCA
BP GO:1900409 positive regulation of cellular response to oxidative stress IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902882 regulation of response to oxidative stress IEP HCCA
BP GO:1902884 positive regulation of response to oxidative stress IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 21 568
No external refs found!