AT5G58700 (ATPLC4, PLC4)

Aliases : ATPLC4, PLC4

Description : phosphatidylinositol-speciwc phospholipase C4

Gene families : OG0000561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000561_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G58700

Target	Alias	Description	ECC score	Gene Family Method
Als_g01020	ATPLC2, PLC2	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.02	OrthoFinder output from all 47 species
Als_g51573	No alias	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene56969.t1	ATPLC2, PLC2,...	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.03	OrthoFinder output from all 47 species
Cba_g25352	ATPLC2, PLC2	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.02	OrthoFinder output from all 47 species
Ceric.16G021800.1	Ceric.16G021800	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.04	OrthoFinder output from all 47 species
Dac_g45282	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g31506	ATPLC2, PLC2	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os05g03610.1	ATPLC2, PLC2,...	phospholipase C (PI-PLC)	0.03	OrthoFinder output from all 47 species
Len_g14511	ATPLC2, PLC2	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.02	OrthoFinder output from all 47 species
Len_g17552	No alias	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.03	OrthoFinder output from all 47 species
Pir_g31966	ATPLC2, PLC2	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008230	No alias	phosphatidylinositol phospholipase *(PI-PLC) & original...	0.05	OrthoFinder output from all 47 species
Solyc10g076710.3.1	ATPLC2, PLC2,...	phospholipase C (PI-PLC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004435	phosphatidylinositol phospholipase C activity	ISS	Interproscan
MF	GO:0004620	phospholipase activity	None	Extended
MF	GO:0004629	phospholipase C activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	ISS	Interproscan
BP	GO:0007165	signal transduction	ISS	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016298	lipase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	ISS	Interproscan
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0042732	D-xylose metabolic process	RCA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0060151	peroxisome localization	RCA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003724	RNA helicase activity	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0004623	phospholipase A2 activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009643	photosynthetic acclimation	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009820	alkaloid metabolic process	IEP	HCCA
BP	GO:0009821	alkaloid biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009956	radial pattern formation	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010080	regulation of floral meristem growth	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0035265	organ growth	IEP	HCCA
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0055088	lipid homeostasis	IEP	HCCA
BP	GO:0055089	fatty acid homeostasis	IEP	HCCA
BP	GO:0055090	acylglycerol homeostasis	IEP	HCCA
BP	GO:0055091	phospholipid homeostasis	IEP	HCCA
BP	GO:0060771	phyllotactic patterning	IEP	HCCA
BP	GO:0060772	leaf phyllotactic patterning	IEP	HCCA
BP	GO:0060774	auxin mediated signaling pathway involved in phyllotactic patterning	IEP	HCCA
BP	GO:0070328	triglyceride homeostasis	IEP	HCCA
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080050	regulation of seed development	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000034	regulation of seed maturation	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA
BP	GO:2000693	positive regulation of seed maturation	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001711	PLipase_C_Pinositol-sp_Y	361	447
IPR000909	PLipase_C_PInositol-sp_X_dom	116	257
IPR015359	PLC_EF-hand-like	29	103
IPR000008	C2_dom	470	571

External Links

No external refs found!

AT5G58700 (ATPLC4, PLC4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation