1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G59110

AT5G59110


Description : subtilisin-like serine protease-related


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59110
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00218650 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G20150 No alias Subtilisin-like serine endopeptidase family protein 0.04 OrthoFinder output from all 47 species
AT4G15040 No alias Subtilisin-like serine endopeptidase family protein 0.1 OrthoFinder output from all 47 species
AT4G21640 No alias Subtilase family protein 0.03 OrthoFinder output from all 47 species
AT5G45640 No alias Subtilisin-like serine endopeptidase family protein 0.04 OrthoFinder output from all 47 species
AT5G58820 No alias Subtilisin-like serine endopeptidase family protein 0.05 OrthoFinder output from all 47 species
AT5G58830 No alias Subtilisin-like serine endopeptidase family protein 0.11 OrthoFinder output from all 47 species
AT5G58840 No alias Subtilase family protein 0.09 OrthoFinder output from all 47 species
AT5G59100 No alias Subtilisin-like serine endopeptidase family protein 0.09 OrthoFinder output from all 47 species
Aop_g10769 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05149.t2 Aspi01Gene05149 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0144.g051592 No alias not classified & original description: CDS=1-2457 0.03 OrthoFinder output from all 47 species
Dcu_g19969 ATSBT5.4, SBT5.4 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021314001 No alias Subtilisin-like protease SBT5.6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024195001 No alias Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Gb_32033 AIR3 protease (SBT5) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64860.1 ARA12, LOC_Os01g64860 protease (SBT1) 0.03 OrthoFinder output from all 47 species
MA_10312280g0020 No alias Subtilisin-like protease SBT4.3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10335311g0010 No alias Subtilisin-like protease SBT4.3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9063970g0010 ALE, ALE1 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Nbi_g09771 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18112 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21570 ALE, ALE1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g39169 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26257 ATSBT5.4, SBT5.4 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60270 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022696 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Solyc01g091920.2.1 ATSBT1.1,... protease (SBT1) 0.03 OrthoFinder output from all 47 species
Solyc02g069630.3.1 Solyc02g069630 protease (SBT2) 0.03 OrthoFinder output from all 47 species
Solyc08g077860.4.1 Solyc08g077860 protease (SBT2) 0.04 OrthoFinder output from all 47 species
Solyc08g079920.2.1 ARA12, Solyc08g079920 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g009750.3.1 Solyc09g009750 protease (SBT4) 0.03 OrthoFinder output from all 47 species
Zm00001e000351_P001 SDD1, Zm00001e000351 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Zm00001e019698_P001 Zm00001e019698 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Zm00001e028977_P001 Zm00001e028977 protease (SBT2) 0.03 OrthoFinder output from all 47 species
Zm00001e034269_P001 Zm00001e034269 protease (SBT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!