AT5G59880 (ADF3)

Aliases : ADF3

Description : actin depolymerizing factor 3

Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G59880

Target	Alias	Description	ECC score	Gene Family Method
AT5G52360	ADF10	actin depolymerizing factor 10	0.03	OrthoFinder output from all 47 species
Adi_g018985	ADF8	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g37371	ADF11	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene06599.t1	ADF8, Aspi01Gene06599	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11730.t1	ADF8, Aspi01Gene11730	actin-depolymerizing factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g009152	ADF7	actin-depolymerizing factor & original description: CDS=19-414	0.02	OrthoFinder output from all 47 species
Dac_g34893	ADF6, ATADF6	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016593001	ATADF1, ADF1, atadf	Cytoskeleton.microfilament network.actin...	0.04	OrthoFinder output from all 47 species
Lfl_g22002	ADF11	actin-depolymerizing factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24482	ADF6, ATADF6	actin-depolymerizing factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g38081	ADF6, ATADF6	actin-depolymerizing factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g32090	ADF10	actin-depolymerizing factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32091	ADF10	actin-depolymerizing factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15608	No alias	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19641	No alias	actin-depolymerizing factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g005360.3.1	ADF2, Solyc06g005360	actin-depolymerizing factor	0.05	OrthoFinder output from all 47 species
Solyc09g090110.3.1	ADF6, ATADF6,...	actin-depolymerizing factor	0.04	OrthoFinder output from all 47 species
Spa_g02914	ADF11	actin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g00178	ADF7	acTin-depolymerizing factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e006186_P001	ATADF4, ADF4,...	actin-depolymerizing factor	0.04	OrthoFinder output from all 47 species
Zm00001e011754_P001	ATADF4, ADF4,...	actin-depolymerizing factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	ISS	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006096	glycolytic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0030042	actin filament depolymerization	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
MF	GO:0051219	phosphoprotein binding	IEP	HCCA
BP	GO:0051261	protein depolymerization	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002108	ADF-H	14	136

External Links

No external refs found!

AT5G59880 (ADF3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation