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  5. AT5G59990

AT5G59990


Description : CCT motif family protein


Gene families : OG0001446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00236750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G41380 No alias CCT motif family protein 0.03 OrthoFinder output from all 47 species
Als_g05064 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20767 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G059800.1 Ceric.27G059800 CMF transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g14890 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019393001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01020352001 ASML2 No description available 0.04 OrthoFinder output from all 47 species
Gb_17450 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g61900.1 LOC_Os01g61900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g16160.1 LOC_Os12g16160 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10434421g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g19568 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25892 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083400.3.1 Solyc03g083400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g066510.4.1 ASML2, Solyc07g066510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g072850.2.1 Solyc11g072850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g096940.3.1 Solyc12g096940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019370_P001 Zm00001e019370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020093_P001 Zm00001e020093 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010036 response to boron-containing substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010254 nectary development IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010434 bract formation IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015166 polyol transmembrane transporter activity IEP HCCA
MF GO:0015168 glycerol transmembrane transporter activity IEP HCCA
MF GO:0015204 urea transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046713 borate transport IEP HCCA
MF GO:0046715 active borate transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0080029 cellular response to boron-containing substance levels IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 164 205
No external refs found!