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AT5G60570


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00042660 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g056279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14130 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g18445 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g22754 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g26601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01346 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aspi01Gene17201.t1 Aspi01Gene17201 substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os04g52830.1 LOC_Os04g52830 F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g01496 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g10337 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g02076 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc05g007220.4.1 Solyc05g007220 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g41282 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g00944 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g07174 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e004827_P001 Zm00001e004827 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038898_P001 Zm00001e038898 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033765 steroid dehydrogenase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 227 272
IPR006652 Kelch_1 179 224
No external refs found!