AT5G61470

Description : C2H2-like zinc finger protein

Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G61470
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00110p00085760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
AMTR_s00137p00104280	AZF3, ZF3,...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
AT2G45120	No alias	C2H2-like zinc finger protein	0.02	OrthoFinder output from all 47 species
AT3G10470	No alias	C2H2-type zinc finger family protein	0.04	OrthoFinder output from all 47 species
AT3G49930	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G04390	No alias	C2H2-type zinc finger family protein	0.04	OrthoFinder output from all 47 species
AT5G56200	No alias	C2H2 type zinc finger transcription factor family	0.06	OrthoFinder output from all 47 species
Adi_g035726	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g050237	No alias	C2H2-type subclass ZAT transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g052775	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g081280	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117370	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19801	No alias	C2H2-type subclass ZAT transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene21356.t1	Aspi01Gene21356	regulatory protein *(DAZ) of male germ cell division &...	0.04	OrthoFinder output from all 47 species
Azfi_s0034.g025422	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.04	OrthoFinder output from all 47 species
Azfi_s0577.g078251	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Dac_g09867	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Dac_g31024	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Ehy_g15214	AZF2, ZF2	C2H2-type subclass ZAT transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01018162001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.01	OrthoFinder output from all 47 species
Gb_16414	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Gb_30808	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Gb_40151	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os03g17150.1	LOC_Os03g17150	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os03g32220.1	CZF2, ZAT6,...	C2H2 zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
LOC_Os03g32230.1	CZF2, ZAT6,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os11g47630.1	LOC_Os11g47630	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os12g39400.1	ZAT10, STZ,...	C2H2 zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
Lfl_g07410	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426425g0010	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
MA_858691g0010	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
MA_922988g0010	No alias	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Msp_g35114	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Nbi_g41772	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Ore_g38982	No alias	C2H2-type subclass ZAT transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g48975	No alias	C2H2-type subclass ZAT transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g47413	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004946	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006193	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007634	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008606	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.04	OrthoFinder output from all 47 species
Solyc05g054650.1.1	Solyc05g054650	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Solyc06g005180.1.1	Solyc06g005180	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc06g060740.3.1	Solyc06g060740	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
Spa_g38932	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.02	OrthoFinder output from all 47 species
Spa_g46547	No alias	regulatory protein *(DAZ) of male germ cell division &...	0.03	OrthoFinder output from all 47 species
Zm00001e002022_P001	Zm00001e002022	C2H2 zinc finger transcription factor	0.07	OrthoFinder output from all 47 species
Zm00001e002063_P001	AZF1, ZF1, Zm00001e002063	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e002344_P001	Zm00001e002344	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e006181_P001	Zm00001e006181	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e011755_P001	AZF1, ZF1, Zm00001e011755	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
Zm00001e023171_P001	Zm00001e023171	C2H2 zinc finger transcription factor	0.07	OrthoFinder output from all 47 species
Zm00001e038054_P001	Zm00001e038054	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e038072_P001	CZF2, ZAT6,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	IEP	HCCA
MF	GO:0004156	dihydropteroate synthase activity	IEP	HCCA
MF	GO:0004564	beta-fructofuranosidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005355	glucose transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
MF	GO:0015119	hexose phosphate transmembrane transporter activity	IEP	HCCA
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015149	hexose transmembrane transporter activity	IEP	HCCA
MF	GO:0015152	glucose-6-phosphate transmembrane transporter activity	IEP	HCCA
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	HCCA
BP	GO:0015712	hexose phosphate transport	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0030656	regulation of vitamin metabolic process	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0045544	gibberellin 20-oxidase activity	IEP	HCCA
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0046137	negative regulation of vitamin metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	HCCA
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
BP	GO:2000082	regulation of L-ascorbic acid biosynthetic process	IEP	HCCA
BP	GO:2000083	negative regulation of L-ascorbic acid biosynthetic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G61470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation