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  5. AT5G62820

AT5G62820


Description : Uncharacterised protein family (UPF0497)


Gene families : OG0003721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62820

Target Alias Description ECC score Gene Family Method Actions
AT3G55390 No alias Uncharacterised protein family (UPF0497) 0.07 OrthoFinder output from all 47 species
LOC_Os03g60250.1 LOC_Os03g60250 CASP-like protein 4B3 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 146 278
No external refs found!