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  5. AT5G63225

AT5G63225


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G63225
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00028p00159770 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.03 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012212001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os04g58555.1 LOC_Os04g58555 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.03 OrthoFinder output from all 47 species
Sam_g35966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc07g062010.1.1 Solyc07g062010 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Tin_g37664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e010706_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e038052_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044347 cell wall polysaccharide catabolic process IEP HCCA
BP GO:0080001 mucilage extrusion from seed coat IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 24 93
No external refs found!