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  5. AT5G63250

AT5G63250


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G63250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00159770 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G66852 No alias Carbohydrate-binding X8 domain superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G66855 No alias Carbohydrate-binding X8 domain superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G66870 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G79480 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G30933 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43660 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G28250 No alias Carbohydrate-binding X8 domain superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G16165 No alias Carbohydrate-binding X8 domain superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G53610 No alias Carbohydrate-binding X8 domain superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G63225 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56641.t1 Aspi01Gene56641 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014563 No alias not classified & original description: CDS=1-228 0.02 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.03 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45823 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g28755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_41331 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50490.3 LOC_Os05g50490 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g28329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g41343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g101120.4.1 Solyc01g101120 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g098410.2.1 Solyc12g098410 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005720_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
CC GO:0031351 obsolete integral component of plastid membrane IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 42 114
No external refs found!