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AT5G63880 (VPS20.1)


Aliases : VPS20.1

Description : SNF7 family protein


Gene families : OG0004858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G63880
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g010251 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aev_g00824 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13752 VPS20.2 component *(VPS20) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0010286 heat acclimation RCA Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 193
No external refs found!