AT5G66730

Description : C2H2-like zinc finger protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G66730

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00204520	IDD2, AtIDD2,...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
Adi_g012802	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g012803	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048017	AtIDD12, IDD12	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0223.g058834	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.24G030700.1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g02301	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g24855	No alias	component *(MED19) of head module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
GSVIVT01025658001	JKD	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
Gb_17209	IDD16, AtIDD16	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g10140.1	LOC_Os03g10140	C2H2 zinc finger transcription factor. elicitor peptide...	0.03	OrthoFinder output from all 47 species
LOC_Os07g39310.1	MGP, LOC_Os07g39310	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
LOC_Os09g27650.2	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Msp_g24448	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g06563	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g17643	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g38471	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016076	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc02g085580.4.1	Solyc02g085580	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc06g075250.3.1	JKD, Solyc06g075250	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g18185	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e004751_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e035365_P003	MGP, Zm00001e035365	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010029	regulation of seed germination	IMP	Interproscan
BP	GO:0010431	seed maturation	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	HCCA
MF	GO:0004713	protein tyrosine kinase activity	IEP	HCCA
MF	GO:0005527	macrolide binding	IEP	HCCA
MF	GO:0005528	FK506 binding	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0010017	red or far-red light signaling pathway	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
CC	GO:0016514	SWI/SNF complex	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0046967	cytosol to endoplasmic reticulum transport	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0071472	cellular response to salt stress	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071489	cellular response to red or far red light	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G66730

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation