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  5. AT5G67385

AT5G67385


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G67385

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00144p00020600 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g04215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22731 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Aop_g13379 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Aop_g17528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001664 No alias not classified & original description: CDS=1-2625 0.03 OrthoFinder output from all 47 species
Ceric.19G029600.1 Ceric.19G029600 not classified & original description: pacid=50576619... 0.03 OrthoFinder output from all 47 species
Ceric.33G050400.1 Ceric.33G050400 not classified & original description: pacid=50606641... 0.03 OrthoFinder output from all 47 species
Dac_g08261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24164 RPT3, NPH3, JK218 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01024541001 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00052 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_00474 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10880.1 LOC_Os03g10880 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g58450 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Nbi_g12476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05915 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092560.3.1 Solyc02g092560 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc09g074630.3.1 Solyc09g074630 BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Zm00001e000726_P002 Zm00001e000726 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008453 alanine-glyoxylate transaminase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009757 hexose mediated signaling IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009882 blue light photoreceptor activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
BP GO:0009904 chloroplast accumulation movement IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010187 negative regulation of seed germination IEP HCCA
BP GO:0010255 glucose mediated signaling pathway IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010617 circadian regulation of calcium ion oscillation IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
MF GO:0043425 bHLH transcription factor binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
MF GO:0047958 glycine:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140297 DNA-binding transcription factor binding IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 201 450
No external refs found!