ATCG00330 (RPS14)

Aliases : RPS14

Description : chloroplast ribosomal protein S14

Gene families : OG0008513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008513_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00330
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
Aev_g27691	RPS14	component *(uS14c) of small plastid ribosomal-subunit...	0.4	OrthoFinder output from all 47 species
Als_g00102	RPS14	component *(uS14c) of small plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cba_g06635	No alias	component *(uS14c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.02G015900.1	RPS14, Ceric.02G015900	component *(uS14c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ceric.09G047600.1	RPS14, Ceric.09G047600	component *(uS14c) of small plastid ribosomal-subunit...	0.15	OrthoFinder output from all 47 species
Ceric.29G032400.1	RPS14, Ceric.29G032400	not classified & original description: pacid=50624769...	0.07	OrthoFinder output from all 47 species
GSVIVT01018700001	No alias	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana	0.07	OrthoFinder output from all 47 species
LOC_Os04g16745.1	LOC_Os04g16745	component psRPS14 of small ribosomal subunit proteome	0.46	OrthoFinder output from all 47 species
LOC_Os10g21244.1	LOC_Os10g21244	component psRPS14 of small ribosomal subunit proteome	0.46	OrthoFinder output from all 47 species
LOC_Os10g38238.1	LOC_Os10g38238	component psRPS14 of small ribosomal subunit proteome	0.46	OrthoFinder output from all 47 species
Mp8g15340.1	No alias	Ribosomal protein S14, mitochondrial OS=Marchantia...	0.07	OrthoFinder output from all 47 species
Pnu_g04766	RPS14	component *(uS14c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Smo137764	RPS14	Protein biosynthesis.organelle translation...	0.11	OrthoFinder output from all 47 species
Solyc00g500055.1.1	RPS14, Solyc00g500055	component psRPS14 of small ribosomal subunit proteome	0.39	OrthoFinder output from all 47 species
Solyc00g500137.1.1	RPS14, Solyc00g500137	component psRPS14 of small ribosomal subunit proteome	0.39	OrthoFinder output from all 47 species
Solyc00g500207.1.1	RPS14, Solyc00g500207	component psRPS14 of small ribosomal subunit proteome	0.39	OrthoFinder output from all 47 species
Solyc00g500363.1.1	RPS14, Solyc00g500363	Ribosomal protein S14, mitochondrial OS=Oenothera...	0.07	OrthoFinder output from all 47 species
Tin_g06301	RPS14	component *(uS14c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000312	plastid small ribosomal subunit	TAS	Interproscan
CC	GO:0000314	organellar small ribosomal subunit	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	TAS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006089	lactate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006412	translation	TAS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009438	methylglyoxal metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009507	chloroplast	TAS	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015935	small ribosomal subunit	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042182	ketone catabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0045333	cellular respiration	RCA	Interproscan
BP	GO:0046185	aldehyde catabolic process	None	Extended
BP	GO:0051596	methylglyoxal catabolic process	None	Extended
BP	GO:0061727	methylglyoxal catabolic process to lactate	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0003959	NADPH dehydrogenase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0009970	cellular response to sulfate starvation	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001209	Ribosomal_S14	46	99

External Links

No external refs found!

ATCG00330 (RPS14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation