ATCG00420 (NDHJ)

Aliases : NDHJ

Description : NADH dehydrogenase subunit J

Gene families : OG0010313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010313_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00420
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00334p00014280	PSBG,...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	OrthoFinder output from all 47 species
Aev_g09764	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.35	OrthoFinder output from all 47 species
Als_g14163	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.07	OrthoFinder output from all 47 species
Aob_g00848	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.05	OrthoFinder output from all 47 species
Ceric.02G013700.1	NDHJ, Ceric.02G013700	component *(NdhJ) of NDH subcomplex A & original...	0.03	OrthoFinder output from all 47 species
Ceric.07G092500.1	NDHJ, Ceric.07G092500	not classified & original description: pacid=50627119...	0.12	OrthoFinder output from all 47 species
Ceric.09G048100.1	NDHJ, Ceric.09G048100	component *(NdhJ) of NDH subcomplex A & original...	0.29	OrthoFinder output from all 47 species
Ceric.27G005900.1	NDHJ, Ceric.27G005900	component *(NdhJ) of NDH subcomplex A & original...	0.29	OrthoFinder output from all 47 species
Ceric.29G033000.1	NDHJ, Ceric.29G033000	not classified & original description: pacid=50625359...	0.04	OrthoFinder output from all 47 species
Gb_17982	NDHJ	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic...	0.02	OrthoFinder output from all 47 species
LOC_Os01g58024.1	NDHJ, LOC_Os01g58024	component NdhJ of NDH subcomplex A	0.5	OrthoFinder output from all 47 species
LOC_Os10g38212.1	NDHJ, LOC_Os10g38212	component NdhJ of NDH subcomplex A	0.5	OrthoFinder output from all 47 species
Lfl_g17288	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.18	OrthoFinder output from all 47 species
Ore_g10963	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.26	OrthoFinder output from all 47 species
Solyc00g500061.1.1	NDHJ, Solyc00g500061	component NdhJ of NDH subcomplex A	0.4	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009507	chloroplast	TAS	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009970	cellular response to sulfate starvation	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	TAS	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000312	plastid small ribosomal subunit	IEP	HCCA
CC	GO:0000314	organellar small ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001268	NADH_UbQ_OxRdtase_30kDa_su	30	148

External Links

No external refs found!

ATCG00420 (NDHJ)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation