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  5. ATCG00440

ATCG00440 (NDHC)


Aliases : NDHC

Description : NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein


Gene families : OG0004953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00440
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT2G07751 No alias NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein 0.05 OrthoFinder output from all 47 species
Aev_g15970 NDHC component *(NdhC) of NDH membrane subcomplex M &... 0.43 OrthoFinder output from all 47 species
Aev_g45078 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.2 OrthoFinder output from all 47 species
Aop_g26379 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.09 OrthoFinder output from all 47 species
Ceric.02G013900.1 NDHC, Ceric.02G013900 component *(NdhC) of NDH membrane subcomplex M &... 0.11 OrthoFinder output from all 47 species
Ceric.04G095500.1 Ceric.04G095500 not classified & original description: pacid=50631068... 0.03 OrthoFinder output from all 47 species
Ceric.05G057400.1 Ceric.05G057400 not classified & original description: pacid=50578518... 0.06 OrthoFinder output from all 47 species
Ceric.16G042200.1 Ceric.16G042200 not classified & original description: pacid=50589685... 0.06 OrthoFinder output from all 47 species
Ceric.1Z122500.1 Ceric.1Z122500 not classified & original description: pacid=50617115... 0.1 OrthoFinder output from all 47 species
Ceric.1Z125700.1 Ceric.1Z125700 not classified & original description: pacid=50604569... 0.08 OrthoFinder output from all 47 species
Ceric.1Z200700.1 Ceric.1Z200700 not classified & original description: pacid=50618883... 0.1 OrthoFinder output from all 47 species
Ceric.1Z247000.1 Ceric.1Z247000 not classified & original description: pacid=50628392... 0.08 OrthoFinder output from all 47 species
Ceric.1Z255200.1 Ceric.1Z255200 not classified & original description: pacid=50617103... 0.1 OrthoFinder output from all 47 species
Ceric.1Z287100.1 Ceric.1Z287100 not classified & original description: pacid=50577018... 0.08 OrthoFinder output from all 47 species
Ceric.1Z287800.1 Ceric.1Z287800 not classified & original description: pacid=50600407... 0.1 OrthoFinder output from all 47 species
Ceric.1Z293700.1 Ceric.1Z293700 not classified & original description: pacid=50576917... 0.11 OrthoFinder output from all 47 species
Ceric.1Z295900.1 Ceric.1Z295900 not classified & original description: pacid=50613699... 0.08 OrthoFinder output from all 47 species
Ceric.1Z308400.1 Ceric.1Z308400 not classified & original description: pacid=50579236... 0.11 OrthoFinder output from all 47 species
Ceric.1Z312600.1 Ceric.1Z312600 not classified & original description: pacid=50597149... 0.11 OrthoFinder output from all 47 species
Ceric.1Z314000.1 Ceric.1Z314000 not classified & original description: pacid=50567671... 0.15 OrthoFinder output from all 47 species
Ceric.1Z318400.1 Ceric.1Z318400 not classified & original description: pacid=50579281... 0.08 OrthoFinder output from all 47 species
Ceric.1Z319800.1 Ceric.1Z319800 not classified & original description: pacid=50604682... 0.1 OrthoFinder output from all 47 species
Ceric.23G013800.1 Ceric.23G013800 not classified & original description: pacid=50610037... 0.05 OrthoFinder output from all 47 species
Ceric.33G061800.1 Ceric.33G061800 not classified & original description: pacid=50606936... 0.1 OrthoFinder output from all 47 species
Ceric.35G023200.1 Ceric.35G023200 not classified & original description: pacid=50581407... 0.03 OrthoFinder output from all 47 species
Cre08.g378900 No alias NADH-ubiquinone oxidoreductase chain 3 OS=Prototheca wickerhamii 0.05 OrthoFinder output from all 47 species
Gb_11359 No alias component NdhC of NDH membrane subcomplex M 0.17 OrthoFinder output from all 47 species
Gb_17126 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38206.1 NDHC, LOC_Os10g38206 component NdhC of NDH membrane subcomplex M 0.53 OrthoFinder output from all 47 species
LOC_Os12g33922.1 LOC_Os12g33922 component ND3/NQO7 of NADH dehydrogenase proton... 0.06 OrthoFinder output from all 47 species
Lfl_g17857 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g35610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41831 NDHC not classified & original description: none 0.29 OrthoFinder output from all 47 species
Pir_g35629 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.23 OrthoFinder output from all 47 species
Pp3c21_8460V3.1 Pp3c21_8460 NADH dehydrogenase 3 0.01 OrthoFinder output from all 47 species
Sam_g01625 No alias component *(ND3/NQO7) of NADH dehydrogenase proton... 0.1 OrthoFinder output from all 47 species
Smo7992 NDHC Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.01 OrthoFinder output from all 47 species
Smo7994 NDHC Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.01 OrthoFinder output from all 47 species
Solyc00g500115.1.1 Solyc00g500115 component ND3/NQO7 of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Solyc09g010890.1.1 NDHC, Solyc09g010890 no hits & (original description: none) 0.27 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast TAS Interproscan
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0015979 photosynthesis TAS Interproscan
BP GO:0042742 defense response to bacterium RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000440 NADH_UbQ/plastoQ_OxRdtase_su3 23 119
No external refs found!