ATCG00470 (ATPE)

Aliases : ATPE

Description : ATP synthase epsilon chain

Gene families : OG0007659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007659_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00470
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00184530	ATPB, PB,...	Photosynthesis.photophosphorylation.ATP synthase...	0.06	OrthoFinder output from all 47 species
Aev_g00175	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.21	OrthoFinder output from all 47 species
Aob_g00470	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ceric.09G048600.1	ATPE, Ceric.09G048600	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.16	OrthoFinder output from all 47 species
Ceric.1Z017800.1	ATPE, Ceric.1Z017800	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Ceric.1Z022100.1	ATPE, Ceric.1Z022100	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Ceric.1Z161900.1	ATPE, Ceric.1Z161900	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Ceric.24G001600.1	ATPE, Ceric.24G001600	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Dcu_g39139	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Gb_04062	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.14	OrthoFinder output from all 47 species
Gb_06833	ATPB, PB	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Gb_25936	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
LOC_Os01g58000.1	ATPE, LOC_Os01g58000	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.21	OrthoFinder output from all 47 species
LOC_Os03g55874.1	ATPB, PB, LOC_Os03g55874	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.19	OrthoFinder output from all 47 species
LOC_Os06g02980.1	ATPB, PB, LOC_Os06g02980	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
LOC_Os06g39756.1	ATPE, LOC_Os06g39756	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.13	OrthoFinder output from all 47 species
LOC_Os12g19430.1	ATPE, LOC_Os12g19430	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Lfl_g18092	ATPE	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	OrthoFinder output from all 47 species
Smo137774	ATPE	Photosynthesis.photophosphorylation.ATP synthase...	0.11	OrthoFinder output from all 47 species
Solyc00g500140.1.1	ATPE, Solyc00g500140	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Zm00001e003900_P001	ATPE, Zm00001e003900	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Zm00001e042031_P001	ATPE, Zm00001e042031	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Zm00001e042052_P001	ATPE, Zm00001e042052	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Zm00001e042080_P001	ATPE, Zm00001e042080	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Zm00001e042096_P001	ATPE, Zm00001e042096	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005261	monoatomic cation channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006354	DNA-templated transcription elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015252	proton channel activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0016469	proton-transporting two-sector ATPase complex	None	Extended
MF	GO:0016874	ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	TAS	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045259	proton-transporting ATP synthase complex	TAS	Interproscan
BP	GO:0045333	cellular respiration	TAS	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	TAS	Interproscan
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000312	plastid small ribosomal subunit	IEP	HCCA
CC	GO:0000313	organellar ribosome	IEP	HCCA
CC	GO:0000314	organellar small ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005754	mitochondrial proton-transporting ATP synthase, catalytic core	IEP	HCCA
BP	GO:0005983	starch catabolic process	IEP	HCCA
BP	GO:0006175	dATP biosynthetic process	IEP	HCCA
BP	GO:0006176	dATP biosynthetic process from ADP	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009151	purine deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009153	purine deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009200	deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009215	purine deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009216	purine deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009251	glucan catabolic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009265	2'-deoxyribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009544	chloroplast ATP synthase complex	IEP	HCCA
CC	GO:0009547	plastid ribosome	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
CC	GO:0010319	stromule	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019692	deoxyribose phosphate metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0042736	NADH kinase activity	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0045037	protein import into chloroplast stroma	IEP	HCCA
MF	GO:0045157	electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity	IEP	HCCA
CC	GO:0045267	proton-transporting ATP synthase, catalytic core	IEP	HCCA
BP	GO:0046060	dATP metabolic process	IEP	HCCA
BP	GO:0046385	deoxyribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1901420	negative regulation of response to alcohol	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020546	ATP_synth_F1_dsu/esu_N	3	81
IPR020547	ATP_synth_F1_esu_C	86	128

External Links

No external refs found!

ATCG00470 (ATPE)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation