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ATCG00530 (YCF10)


Aliases : YCF10

Description : CemA-like proton extrusion protein-related


Gene families : OG0002952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00530
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Aev_g16178 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.47 OrthoFinder output from all 47 species
Ala_g06422 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.1 OrthoFinder output from all 47 species
Als_g20581 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.16 OrthoFinder output from all 47 species
Aob_g35850 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Ceric.02G014600.1 YCF10, Ceric.02G014600 regulatory protein *(YCF10) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ceric.05G050100.1 YCF10, Ceric.05G050100 regulatory protein *(YCF10) of non-photochemical... 0.33 OrthoFinder output from all 47 species
Ceric.16G018200.1 YCF10, Ceric.16G018200 regulatory protein *(YCF10) of non-photochemical... 0.21 OrthoFinder output from all 47 species
Ceric.33G022600.1 YCF10, Ceric.33G022600 regulatory protein *(YCF10) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ceric.38G006900.1 YCF10, Ceric.38G006900 regulatory protein *(YCF10) of non-photochemical... 0.33 OrthoFinder output from all 47 species
Dcu_g22332 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.13 OrthoFinder output from all 47 species
GSVIVT01017636001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01029875001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.12 OrthoFinder output from all 47 species
GSVIVT01030620001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.12 OrthoFinder output from all 47 species
GSVIVT01037398001 YCF10 Chloroplast envelope membrane protein OS=Manihot esculenta 0.1 OrthoFinder output from all 47 species
Gb_18347 No alias Chloroplast envelope membrane protein OS=Ginkgo biloba... 0.17 OrthoFinder output from all 47 species
LOC_Os02g24598.1 YCF10, LOC_Os02g24598 Chloroplast envelope membrane protein OS=Oryza sativa... 0.51 OrthoFinder output from all 47 species
Len_g13439 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Lfl_g40541 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.23 OrthoFinder output from all 47 species
Ore_g07353 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.23 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002243 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004282 CemA 3 229
No external refs found!