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  5. ATCG00770

ATCG00770 (RPS8)


Aliases : RPS8

Description : ribosomal protein S8


Gene families : OG0009333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00770
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Aev_g03624 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.36 OrthoFinder output from all 47 species
Ceric.05G042100.1 RPS8, Ceric.05G042100 component *(uS8c) of small plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Ceric.05G049100.1 RPS8, Ceric.05G049100 component *(uS8c) of small plastid ribosomal-subunit... 0.18 OrthoFinder output from all 47 species
Ceric.05G052000.1 RPS8, Ceric.05G052000 component *(uS8c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ceric.12G058400.1 RPS8, Ceric.12G058400 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.29G004100.1 RPS8, Ceric.29G004100 component *(uS8c) of small plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Ceric.38G008900.1 RPS8, Ceric.38G008900 component *(uS8c) of small plastid ribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Ehy_g00053 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01014320001 No alias 30S ribosomal protein S8, chloroplastic OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
LOC_Os04g16832.1 RPS8, LOC_Os04g16832 component psRPS8 of small ribosomal subunit proteome 0.31 OrthoFinder output from all 47 species
LOC_Os05g22718.1 RPS8, LOC_Os05g22718 component psRPS8 of small ribosomal subunit proteome 0.31 OrthoFinder output from all 47 species
LOC_Os08g15278.1 RPS8, LOC_Os08g15278 component psRPS8 of small ribosomal subunit proteome 0.31 OrthoFinder output from all 47 species
MA_94412g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mpzg00740.1 RPS8 component psRPS8 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Msp_g24542 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Nbi_g03453 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Pir_g10782 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.19 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023358 RPS8 not classified & original description: CDS=1-339 0.15 OrthoFinder output from all 47 species
Sam_g01596 No alias component *(uS8c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo137784 RPS8 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc00g500031.1.1 RPS8, Solyc00g500031 component psRPL14 of large ribosomal subunit proteome.... 0.17 OrthoFinder output from all 47 species
Solyc00g500076.1.1 RPS8, Solyc00g500076 component psRPL14 of large ribosomal subunit proteome.... 0.17 OrthoFinder output from all 47 species
Spa_g00741 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g37385 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000312 plastid small ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome TAS Interproscan
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000313 organellar ribosome IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009547 plastid ribosome IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0010319 stromule IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 4 134
No external refs found!