ATMG00210 (RPL5)

Aliases : RPL5

Description : ribosomal protein L5

Gene families : OG0009865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATMG00210
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00054p00223510	evm_27.TU.AmTr_v1...	60S ribosomal protein L5, mitochondrial OS=Brassica napus	0.07	OrthoFinder output from all 47 species
AMTR_s00127p00094990	evm_27.TU.AmTr_v1...	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum	0.08	OrthoFinder output from all 47 species
AMTR_s00251p00014110	RPS14,...	Protein biosynthesis.organelle translation...	0.07	OrthoFinder output from all 47 species
AMTR_s00363p00007720	evm_27.TU.AmTr_v1...	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum	0.03	OrthoFinder output from all 47 species
AMTR_s00370p00007710	evm_27.TU.AmTr_v1...	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum	0.05	OrthoFinder output from all 47 species
Aev_g12839	No alias	component *(uL5m) of large mitoribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Aob_g39208	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Gb_34381	No alias	60S ribosomal protein L5, mitochondrial OS=Oenothera...	0.07	OrthoFinder output from all 47 species
LOC_Os09g08890.1	LOC_Os09g08890	component mtRPL5 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Lfl_g08344	No alias	component *(uL5m) of large mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Mp2g12110.1	No alias	component mtRPL5 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Nbi_g26173	No alias	component *(uL5m) of large mitoribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Pir_g07842	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15215	No alias	component *(uL5m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc00g500362.1.1	Solyc00g500362	component mtRPL5 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005762	mitochondrial large ribosomal subunit	TAS	Interproscan
BP	GO:0006412	translation	TAS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

ATMG00210 (RPL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation